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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904349.1_cds_XP_016454485.1_48507
CDS Infomation

[gene=LOC107778715] [db_xref=GeneID:107778715] [protein=endoglucanase 17-like] [protein_id=XP_016454485.1] [location=join(26539..26793,27102..27308,27388..27588,27728..27820,27932..28093,28212..28323,28416..28579,28680..29012)] [gbkey=CDS]
Sequence

ATGGCTTTCTTTTACATTTCTTCTTCCAAACTAGCTTTACTTGTTCTGCTCTGCTTCACT
GCCTCTTATCTGCTTCATTGCAGTGCCCACTCTGACCACCATGGCCGTCATCCTCACTAT
GCCTCTCACAATTACAGAGATGCTCTCACCAAATCCATTCTCTTCTTTGAAGGTCAGAGG
TCAGGCAAGCTCCCTCCTAACCAGAGAGTCACTTGGCGTAGAAACTCCGCTCTTTCAGAT
GGCTCCGCATTGCATGTTGATTTGGTTGGGGGATATTATGATGCAGGGGACAATGTGAAG
TTTGGGTTCCCAATGGCATTCACCACCACTATGCTATCATGGAGTGTGATTGAGTTTGGT
GGAGTGATGAAAGGAGAGCTCCAGAATGCAAGACAAGCCGTTCGCTGGGCCACTGACTAT
CTTCTCAAGGCCACTGCCTATCCAGACACCATATTTGTTCAGGTGGGGGAAGCAGGAAGT
GACCATGCTTGCTGGGAGAGACCTGAGGATATGGACACCCCAAGAAGTGTATTCAAGATT
GACAAAAACACTCCAGGGACTGAAGTAGCTGCAGAGACCGCTGCTGCTCTTTCTGCTGCT
TCTTTGGTTTTCAGAAAAAGTGATCCCACTTACTCCAAGCTCCTTGTGAGGAGGGCCATC
AGGGTGTTTGAATTTGCGGACAAGTACAGAGGTTCCTATAGCGATGGATTGAAGAACATC
GTCTGCCCCTTTTATTGCTCATATTCCGGATACCAGGACGAGCTGTTATGGGGTGCTGCG
TGGTTACATCGAGCCACGAAGAACCCTTTTTACCTACATTATATCCAAAGAAACGGGCAA
AACCTTGGGGCCGACCAGAGTGATAACACATTTTGTTGGGACAACAAGCATGTTGGAGCA
AGGATTCTTCTTTCCAAGGCATTTATTGTTCAAAAGCTTCAATCTCTCCATGATTTCAAG
AGTCACGCAGACAACTACATTTGCTCCGTCATCCCATGGACACCCATGTCTCAAGCACAA
TATACTCCAGGAGGGCTACTCTTCACTATGAGTGACAGCAACATGCAATATGTGACATCC
ACCTCTTTCCTGCTGGTAACCTATGCCAAGTACTTGACCTCCGCTCACATGGCTGTGAAT
TGTGGTGGCGTTCTTGTCACGCCAAAAATGCTACGAAATCTTGCCAAAAAGCAGGTGGAC
TATCTGTTGGGAGATAATCCATTAAAAATGTCGTATATGGTTGGATATGGGACTAGGTAC
CCGCAGAGGATTCACCATCGAGGATCGTCTTTGCCATCGATGGTGGTGCACCCAACAAAG
ATACAATGCTCGTCGGGGTTCAGCATGTATAACTCGCAGAATCCAAACCCGAATATTCTG
GTGGGTGCTGTAGTTGGTGGACCGGACCAGCATGATAACTTTCCAGACCAGCGCTCAGAT
TATGAGCAATCGGAGCCAGCCACTTACATTAATGCCCCGCTGGTTGGATCGCTGGCTTAC
CTTGCACACTCGTTCGGCCAACTCTAG

Peptide Sequence

PEP ID

XP_016454485.1
PEP Infomation

PREDICTED: endoglucanase 17-like [Nicotiana tabacum]
Sequence

MAFFYISSSKLALLVLLCFTASYLLHCSAHSDHHGRHPHYASHNYRDALTKSILFFEGQR
SGKLPPNQRVTWRRNSALSDGSALHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFG
GVMKGELQNARQAVRWATDYLLKATAYPDTIFVQVGEAGSDHACWERPEDMDTPRSVFKI
DKNTPGTEVAAETAAALSAASLVFRKSDPTYSKLLVRRAIRVFEFADKYRGSYSDGLKNI
VCPFYCSYSGYQDELLWGAAWLHRATKNPFYLHYIQRNGQNLGADQSDNTFCWDNKHVGA
RILLSKAFIVQKLQSLHDFKSHADNYICSVIPWTPMSQAQYTPGGLLFTMSDSNMQYVTS
TSFLLVTYAKYLTSAHMAVNCGGVLVTPKMLRNLAKKQVDYLLGDNPLKMSYMVGYGTRY
PQRIHHRGSSLPSMVVHPTKIQCSSGFSMYNSQNPNPNILVGAVVGGPDQHDNFPDQRSD
YEQSEPATYINAPLVGSLAYLAHSFGQL

Transcript Sequence

Gene sequence data has not been registered.